PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_14440.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 116aa    MW: 13421.8 Da    PI: 9.8991
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_14440.1_g00002.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.7e-0984110430
                              XCHHHCHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeiee 30 
                              ++r +r+ kNRe+A rsR+RK++++  
  Rsa1.0_14440.1_g00002.1  84 DRRHKRMTKNRESAVRSRARKQERVSP 110
                              799*********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579593.52E-585109No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-585109No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MEEVWKEINL ASLHQRRQLN IDHEPLNQEL PPLSSSTQHG SFLPPPATVL SLNPHSIDTH  60
FDESSRFGCS EKKRSQDSDE SRGDRRHKRM TKNRESAVRS RARKQERVSP YTSSPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013606641.13e-55PREDICTED: protein FD-like isoform X1
RefseqXP_013606642.13e-55PREDICTED: protein FD-like isoform X2
SwissprotQ7PCC62e-35FDP_ARATH; bZIP transcription factor 27
TrEMBLM4F8402e-61M4F840_BRARP; Uncharacterized protein
STRINGBra037251.1-P4e-61(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.12e-40basic region/leucine zipper motif 27